Dietary protein perhaps more than any other nutrient has been historically celebrated and condemned in the realm of sports nutrition. Discrepancies in opinion/conclusion are affected by population specificity and variables ranging from total kilocalorie (kcal) intake, to injury, to training status, to dietary protein choice(s). The multiple roles of dietary protein and key amino acids such as leucine and glutamine create a variety of potential applications for hard-training athletes. These applications extend beyond acute ergogenesis or body composition improvements which are unlikely and often negative in the literature [1–4]. Dietary protein and select amino acids may be important for athletes during negative energy balance, injuries that do not preclude participation, endocrine exacerbations common to staleness and competition, and immune suppression. Among these interrelated factors, inadequacy of dietary intake may be paramount. An assumption of adequate protein intake during a nutrition assessment should not be made considering suboptimal caloric quantity and quality which are common among athletes and known to elevate protein needs [5–7]. Indeed, it has been stated that: "Although most endurance athletes get enough protein to support any increased requirements, those with low energy or carbohydrate intakes may require nutritional advice to optimize dietary protein intake [5]. " This paper will explore the unique and multi-faceted nature of free-living, under-recovered athletes, and how the stresses they encounter may affect protein needs.

The physical adaptations and stressors of free-living athletes make their energy needs for weight maintenance and normal physiological function substantially different from a "healthy" sedentary person or those in controlled research settings. Both structural and functional tissues are demonstrably modified within weeks, and even days, of training, and these changes are known to increase energy requirements. For example, increased fat-free mass carries a greater energy demand than fat mass. Although the effect on energy expenditure may be lower than once thought at 13 kcal·kg^-1 muscle mass [8], additional kilograms that are specifically lean tissue are not accounted for in energy estimate calculations, such as the common Harris Benedict equation. In addition, body composition assessments to calculate resting metabolic rate, such as hydrodensitometry and dual energy x-ray absorptiometry, have been reported to underestimate fat-free mass [9]. Hence in sports nutrition practice settings, a misunderstanding of the energy demands of exercise and accompanying structural alterations could compromise energy balance and weight maintenance.

Despite elevated energy requirements of frequent training and increased lean mass, research indicates that the majority of athletes fail to eat enough calories to maintain energy balance [6, 10, 11]. Initiating large energy expenditure by athletes does not necessarily induce a compensatory increase in food consumption [12]. Possible reasons for poor intakes could include ignorance, lack of appetite, lax dietary habits or conversely, misguided dietary discipline. An important consideration in counseling athletes is their mindset towards nutrition compared to non-athletes. Beyond merely focusing on a small number of food items that are perceived as "healthy", some athletes also suffer true eating disorders. Disordered eating has been reported by 21–48% of NCAA programs with cross country, track and gymnastics teams [13]. When combined with the additional muscle mass that is characteristic of athletes and higher intensity-volume mesocycles, purposefully restricted intake can become problematic.

In support of physical adaptations and biological demands, protein requirements have been estimated for healthy, eucaloric endurance athletes at 1.2–1.4 g/kg·d^-1 and slightly more (up to 1.7 g/kg·d^-1) for resistance training athletes [5, 14]. Increased protein needs remains controversial and conclusions depend upon initial training status and research methodology. For example, recent isotopic data from McMaster University (Del Bel, et al., 2005; Ontario Exercise Physiology Conference) suggest lower rather than higher protein requirements in adapted resistance trainers consuming ample energy. Whether the enhanced protein robustness is related to the classical "armor plating effect" (e.g. reduced damage response to repeat bouts) or is simply related to a tightly-controlled, facilitative energy balance is not known. Adequate energy intake is an important control variable in such research, given that a negative energy state is known to elevate protein requirements [5, 7]. Indeed, escalating energy intakes do result in escalating nitrogen accretion [15], but achieving a healthy, large energy surplus is not a simple practice among free-living athletes who engage in more than just controlled exercise training [6, 11].

A goal of many athletes is the acquisition of new and/or "restructured" muscle mass, but protein synthesis is an energy-costly process. It has been estimated that a 2300–3500 kcal surplus is required to build each pound of new muscle tissue [4]. It remains to be settled, however, which macronutrient combination is optimal in supplying this surplus energy. For example, for free-living athletes who regularly experience muscle microtrauma, which is known to interfere with insulin action and glycogen resynthesis [16], one might question a high (70% of kcal or more) carbohydrate diet. The amino acid leucine presents a possible, partial alternative to carbohydrate during ongoing microtrauma, as leucine has been shown to stimulate aspects of the insulin signaling pathway [17, 18] and can itself be oxidized in skeletal muscle [5]. Also supportive of amino acids as a partial alternative to carbohydrate is the ability of glutamine to donate its carbons to glycogen [19]. Although intriguing, the efficacy of glutamine for practical glycogen replenishment remains to be elucidated. Finally, regarding complete proteins, Brodsky and colleagues [20] reported improved muscle protein anabolism with an ample protein intake versus a minimal one during eucaloric comparisons. Specifically, these investigators noticed higher fractional synthetic rate of myosin heavy chain of the vastus lateralis comparing protein intakes of 1.67 g/kg·d^-1 compared to minimal 0.71 g/kg·d^-1.

Aside from energy balance, another potential difference between some existing research and the apparently persistent affinity of free-living athletes for protein could be the timing of protein ingestion [14]. Data clearly indicate that dietary protein or essential amino acid mixtures enhance net protein balance pre- and post-resistance exercise [3, 21, 22]. Properly timed protein intake, particularly when accompanied by additional leucine, can enhance protein balance more than carbohydrate alone[22]. Recent reports describe how branched-chain amino acids (BCAA) and leucine in particular are likely to act acutely via intracellular signaling pathways that support the initiation of protein synthesis. When BCAA are administered during and after resistance exercise, phosphorylation of the mammalian target of rapamycin (mTOR) leads to a sequence of (anabolic) enzymatic activations that are not seen to equal extent when BCAA are withheld [23]. It should be noted also that the type of prior training affects the type of intracellular adaptive response under non-supplemented conditions [24]. Nonetheless humans under different stimuli – that is endurance and resistance exercise – exhibit an increase in protein balance when BCAA/protein are administered within approximately two hours post-exercise [23]. Further, the observance of leucine's particular anabolic effect may also be related to the otherwise falling concentrations of this amino acid in serum during training [2].

Athletes who frequently consume (or over-consume) protein may actually be coincidentally fulfilling pre- and post-exercise windows of opportunity. Considering the absence of any consensus that dietary protein is harmful to the long-term health of non-diseased athletes, moderately over-consumed protein would be less detrimental than under-consumed protein. As examples, Luscombe-Marsh and colleagues [25] reported no change in calcium excretion, bone turnover, or inflammation among subjects ingesting a 34% protein diet; Wrone et al [26] reported that protein intake was not related to microalbuminuria in non-diabetic, non-hypertensive persons.

However, in situations of clearly overzealous protein intake (perhaps greater than 2.2 g/kg per day) or in the case of excessive supplementation versus whole foods, education on potential negatives is warranted. Aside from simple waste (deamination and increased urinary nitrogen excretion) athlete-specific issues can occur. As reviewed by Gleeson and Bishop [6], a protein-rich intake (24% of kcal) during four days of very low carbohydrate intake (3% of kcal) can ironically depress muscle and plasma glutamine by 25%. Hence, a severe devaluation of dietary carbohydrate intake in favor of protein could impact immune function and muscle metabolism. Moreover, Hiscock, et al [27] reported that glutamine and glutamine-rich protein supplementation increase interleukin-6 in the plasma of subjects during long duration, relatively intense cycling (two hours at 75% VO₂ peak). Although described as an enhancement, this elevation in catabolic, pro-inflammatory interleukin-6 could be viewed as a negative if experienced too frequently. It is currently not clear whether the reported anti-catabolic effects of glutamine [27] would ultimately outweigh any negative impact of the cytokine. In summary, in situations where very large amounts of dietary protein are being consumed or during training cycles that do not strain an athlete's capacity, counseling on well-timed protein intake can be an alternative to large overall amounts or single amino acid preparations.

Athletes experience a variety of injuries such as muscle microtrauma (principally due to eccentric contractions), soft tissue and skeletal insults, and surgery. Athletic injuries are common, occur among groups of stale athletes, and are not always met with adequate time away from the exercise regime [28, 29]. Galambos, et al. [29] recently reported that 67% of athletes at the Queensland Academy of Sport are injured annually, while 18% were injured at the time of their investigation. Among NCAA Division I football players, approximately one in 20 "exposures" (practices and games) result in injuries [28]. And fully 77.5% of these injuries are the "non-time-loss" type [28], meaning that the athletes could experience higher energy and protein needs from the injury (-ies) in addition to training demands.

The least severe form of exercise-induced injury is muscle microtrauma with delayed onset muscle soreness. Albeit purposeful, microtrauma exhibits metabolic characteristics similar to clinical trauma but presents a briefer alteration. Energy needs are increased up to 48 hours [30, 31] while relative insulin insensitivity interferes with optimal use of needed carbohydrate kilocalories [16]. Increased fat oxidation among both clinically injured persons and eccentrically exercised subjects further suggests a shift away from overall carbohydrate metabolism [30, 32]. The metabolic coordination of events leading to reduced carbohydrate oxidation may be an attempt by the body to deal with (muscle) insulin resistance and spare diminishing glycogen reserves.

Beyond microtrauma, athletes endure soft tissue injuries and skeletal injuries, which could increase energy and protein needs further. As general examples, minor surgeries increase basal metabolic rate (BMR) by 24% while skeletal trauma has been reported to increase BMR 32% [33]. A fracture of a long bone can also induce a decrease in carbohydrate oxidation that only slowly recovers over three weeks [32]. Additionally, protein-specific needs have been long-known to increase during injury, as evidenced by urinary nitrogen loss [33]. Such nitrogen catabolism is of particular concern due to the increased contribution of muscle tissue to whole body protein breakdown seen in skeletal trauma [34]. While not all recovering athletes resume full-time training status, it is common knowledge that many resume exercise by means of altered exercise regimes. Hence, a combination of elevated metabolic rate, aberrations in skeletal muscle metabolism, and resumed exercise sessions could create a negative energy balance that leads to higher protein needs.

Another example in which athletic discipline could "backfire" is training load. This is true from both the coach's and the athlete's perspective. Ongoing twice-daily (or even prolonged and intense once-daily) practices do not allow for adequate recovery. This can be illustrated by the necessary time course for multiple variables to return to baseline values [35], or by reduced performance and/or fatigue [36]. When uncorrected, overtraining can ensue.

Dietary protein and select amino acids present possible corrective measures against the effects of overtraining and underperformance. The addition of protein to a moderate-carbohydrate meal has been reported to improve glycogen synthetic rate and enhance exercise performance after an initial exercise bout, when compared to a moderate-carbohydrate meal alone [37, 38]. Branched-chain amino acids, although often ineffective during acute performance tests [4], have been reported to reduce visceral fat while maintaining performance among in-training athletes experiencing a moderately negative energy balance [2]. Amino acid supplementation has been shown to reduce decrements in bench press and squat performance during overreaching [39]. Further, the amino acid glutamine serves multiple roles of interest to athletes such as growth hormone secretion, collagen formation, and renal acid excretion [40–43] but also declines in serum (and muscle) during training and overtraining [44].

A stale or overtrained state can be accompanied by a reduced sex hormone:cortisol ratio and elevated catecholamines, depending on the type of overtraining [45–48]. Although not always present, hypercortisolemia relative to baseline could be problematic and is not limited to overtraining and poor performance. Competing soccer players have exhibited higher cortisol concentrations during a season, simultaneously with declining glutamine concentrations [49]. Professional cyclists can exhibit relative hypercortisolemia unrelated to performance [47]. Yet concerns over increased stress hormones reach beyond performance. Cortisol is not only a catabolic hormone but elevates metabolic rate [50]. Catabolic and hyper-metabolic effects would have longer-term consequences, affecting body composition and immune status over time, rather than short-term performance. Thus, the overtrained or mid-season endocrine profile suggests catabolism and further-elevated energy and protein needs. Although meals and protein-rich diets increase cortisol concentrations relative to fasting or carbohydrate-rich diets [51, 52], exercise changes this scenario [51]. Contrary to sedentary settings, select amino acids and proteins may actually counteract the elevation and/or catabolic effects of exercise-induced cortisol, as well as improve sleep [53–55].

Psychological stress and sleep debt are parts of many competitive athletes' lives. Intense, frequent pre-season practices and in-season practices, coupled with ongoing competitions, add an additional element of emotional and neuro-endocrine stress beyond that seen in controlled research settings. Emotional stress and sleep quality are not typically addressed in studies of protein requirements but are known to interfere with carbohydrate metabolism and could raise energy expenditure.

The immune system plays an important role in physical recovery from exercise, being a necessary part of the tissue repair process [35]. Leukocytosis and cytokine elevations are stimulated during a variety of exercise types [35, 56]. However, an elevated white cell count can be severe enough to temporarily stimulate sepsis and at least some of its accompanying inflammatory catabolic cytokines (particularly interleukin-6) [56]. Routinely elevated interleukin-6 is not likely to facilitate maintained muscle mass. Hence, repeated immune stimulation via exercise can be both helpful and detrimental to the goals of an athlete, depending on the magnitude and frequency of its response. Chronic immune system depression is detrimental and becomes apparent relatively quickly during times of overtraining [57], and during intentional weight reduction undertaken in pursuit of a weight class, such as in judo [58].

Dietary protein plays a known role in immune system maintenance. When considering the additional immunological stress of athletes, this importance could be increased. Hence, both total protein intake and specific amino acids or protein choices deserve consideration. Moldawer estimated that sustained neutrophilia (neutrophils normally comprising about 60% of the white cell count) can require 30 grams of protein daily, based upon the total increase in cell number and their half-life (American Dietetic Association annual meeting, 1995). Although inter-organ exchange of amino acids can supply this, dietary protein may play a role in supplying a portion, sparing muscle tissue. Additionally, white cells oxidize the amino acid glutamine as fuel at a time when muscle and serum concentrations of glutamine fall from exercise and ongoing training [44, 49, 59]. A glutamine "tug-of-war" then results that could leave both skeletal muscle and the immune system under-supplied. According to Wilmore and Shabert [60]: "During inflammatory states, glutamine consumption may outstrip endogenous production and a relative glutamine deficiency state may exist." Wischmeyer and colleagues [61] have reported that glutamine increases heat shock protein expression and decreases inflammatory cytokines in vitro and in vivo. Recent rodent data involving exercise does suggest increased neutrophil survival and function after high-dose glutamine supplementation [62]. Glutamine has also been reported to decrease upper respiratory tact infections and increase nasal immunoglobulin-A (Ig-A) [63, 64], although it does not apparently elevate salivary Ig-A or affect leukocyte subsets [11, 64]. Lastly, bioactive peptides in milk proteins may also provide immune support as they have been shown to be anti-microbial, while potentially enhancing tissue growth [65].

Immune defenses are not the only defenses deserving consideration during training. Maintained antioxidant capability may also require dietary support. The multiple types of oxidative stress experienced by athletes arguably place them at greater risk than non-athletes. Pro-oxidative processes in athletes, from mitochondrial processing, to leukocytic activity, to reperfusion "injury" are examples of elevated oxidative stress [66]. As with immune stimulation, production of free radicals in the body is beneficial but only when over-stimulation is avoided. Pederson and Hoffman [57] have suggested that pro-inflammatory cytokines increase the risk of lymphocyte damage via reactive oxygen species. Elevated oxidative stress appears to have a dietary link; both total protein intake and the type of protein or amino acid intake matter. Recent research comparing a minimal protein intake of 0.75 g/kg·d^-1 with the "habitual" intake of 1.13 g/kg·d^-1 resulted in decreased erythrocyte glutathione concentrations and kinetics among non-athletes [67]. The authors suggested "increased susceptibility to oxidant stress", a situation that could be made more severe among athletes. Regarding protein type, whey protein has been shown to mitigate a training-induced decline in monocyte and whole-blood glutathione concentrations [68]. Regarding amino acids, Rutten et al. [69] recently reported a high correlation between muscle glutamate concentrations and muscle glutathione concentration. Further, these authors stated that nutritional supplementation with the glutamate precursors, glutamine, ornithine-alpha-ketoglutarate or BCAA can influence muscle glutamate status.

The requirements of a competitive season, both physical and psychological, create a unique and under-addressed scenario regarding dietary protein. Indeed, the variety of stresses faced by competing athletes may make them inappropriate recipients of some protein research. Negative energy balance, for example, is purposefully avoided in most studies on protein requirements yet is common to free-living athletes [6, 11]. This state of "involuntary dieting" increases protein needs and can result from more than simply the reduced appetite accompanying an over-reached state. The gross energy demands of two-a-day team practices coupled with concomitant resistance training, the hypermetabolism of routine muscle microtrauma [30, 31], the elevated energy needs of accidental injury during practices [33], stress hormone elevations (i.e. cortisol and catecholamines) [46, 48, 50], cytokine elevations (e.g. interleukin-6) and related immune stress [57, 70], and sleep disturbances [46, 71] all contribute in an inter-related fashion. Although carbohydrate can and should supply much of the needed kcal, its metabolism can be hampered by many of these factors. Hence, the often-recommended 70% carbohydrate diet (by kcal) appears excessive in many cases. Dietary protein then returns to the forefront of nutritional support for athlete client and patients.

Additionally, amino acids such as glutamine and leucine continue to find acute and indirect research support for the stresses and goals of athletes. Although it is premature to form a consensus on their value due to the methodological constraints of short-term research [3, 57], the "safe pharmacologic profile" of glutamine [55] and the "strong theoretical basis ... for expecting a beneficial effect of a protein supplement in active people [3]" suggests a case-by-case application be considered. Whether the application would be additional individual amino acids (or their peptides) or complete proteins such as whey and casein, remains at the discretion of the sports nutritionist. In any case, select amino acids and complete proteins are potential tools in the sports nutritionist's "toolbox".